Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 WSC2YNL283C 1512 nt9.62□□□□□ -0.87
CDC39P25655 CRR1YLR213C 1269 nt9.58□□□□□ -0.88
CDC39P25655 DDR2YOL052C-A 186 nt9.58□□□□□ -0.88
CDC39P25655 YFL054CYFL054C 1941 nt9.57□□□□□ -0.88
CDC39P25655 SPT8YLR055C 1809 nt9.56□□□□□ -0.88
CDC39P25655 GAL1YBR020W 1587 nt9.56□□□□□ -0.88
CDC39P25655 NVJ2YPR091C 2313 nt9.55□□□□□ -0.88
CDC39P25655 ERF2YLR246W 1080 nt9.54□□□□□ -0.88
CDC39P25655 TRM5YHR070W 1500 nt9.53□□□□□ -0.88
CDC39P25655 PAC11YDR488C 1602 nt9.51□□□□□ -0.89
CDC39P25655 MIC10YCL057C-A 294 nt9.51□□□□□ -0.89
CDC39P25655 AQY1YPR192W 918 nt9.5□□□□□ -0.89
CDC39P25655 TAD3YLR316C 969 nt9.49□□□□□ -0.89
CDC39P25655 AHT1YHR093W 549 nt9.49□□□□□ -0.89
CDC39P25655 YDR524C-BYDR524C-B 201 nt9.48□□□□□ -0.89
CDC39P25655 RNQ1YCL028W 1218 nt9.48□□□□□ -0.89
CDC39P25655 YDL086C-AYDL086C-A 435 nt9.45□□□□□ -0.9
CDC39P25655 YSP3YOR003W 1437 nt9.45□□□□□ -0.9
CDC39P25655 YNL115CYNL115C 1935 nt9.44□□□□□ -0.9
CDC39P25655 YLR415CYLR415C 339 nt9.44□□□□□ -0.9
CDC39P25655 MIR1YJR077C 936 nt9.41□□□□□ -0.9
CDC39P25655 PEX25YPL112C 1185 nt9.41□□□□□ -0.9
CDC39P25655 BDH1YAL060W 1149 nt9.4□□□□□ -0.91
CDC39P25655 ANP1YEL036C 1503 nt9.39□□□□□ -0.91
CDC39P25655 SPC25YER018C 666 nt9.38□□□□□ -0.91
CDC39P25655 GPI16YHR188C 1833 nt9.38□□□□□ -0.91
CDC39P25655 CCT4YDL143W 1587 nt9.36□□□□□ -0.91
CDC39P25655 VPS75YNL246W 795 nt9.35□□□□□ -0.91
CDC39P25655 SNG1YGR197C 1644 nt9.34□□□□□ -0.91
CDC39P25655 STB1YNL309W 1263 nt9.34□□□□□ -0.91
CDC39P25655 ALG3YBL082C 1377 nt9.33□□□□□ -0.92
CDC39P25655 YFL067WYFL067W 528 nt9.33□□□□□ -0.92
CDC39P25655 GLK1YCL040W 1503 nt9.33□□□□□ -0.92
CDC39P25655 MSF1YPR047W 1410 nt9.31□□□□□ -0.92
CDC39P25655 SWE1YJL187C 2460 nt9.31□□□□□ -0.92
CDC39P25655 FEN2YCR028C 1539 nt9.31□□□□□ -0.92
CDC39P25655 YMR244WYMR244W 1068 nt9.3□□□□□ -0.92
CDC39P25655 YIR016WYIR016W 798 nt9.28□□□□□ -0.92
CDC39P25655 SWC5YBR231C 912 nt9.28□□□□□ -0.92
CDC39P25655 VPS60YDR486C 690 nt9.26□□□□□ -0.93
CDC39P25655 NAT4YMR069W 858 nt9.25□□□□□ -0.93
CDC39P25655 HEM12YDR047W 1089 nt9.25□□□□□ -0.93
CDC39P25655 GLR1YPL091W 1452 nt9.19□□□□□ -0.94
CDC39P25655 YGR201CYGR201C 678 nt9.18□□□□□ -0.94
CDC39P25655 AGP1YCL025C 1902 nt9.18□□□□□ -0.94
CDC39P25655 TIM17YJL143W 477 nt9.17□□□□□ -0.94
CDC39P25655 UBA4YHR111W 1323 nt9.15□□□□□ -0.95
CDC39P25655 RBG2YGR173W 1107 nt9.14□□□□□ -0.95
CDC39P25655 NDI1YML120C 1542 nt9.13□□□□□ -0.95
CDC39P25655 MIC12YBR262C 321 nt9.11□□□□□ -0.95
CDC39P25655 CCA1YER168C 1641 nt9.1□□□□□ -0.95
CDC39P25655 SHM2YLR058C 1410 nt9.09□□□□□ -0.95
CDC39P25655 THI74YDR438W 1113 nt9.08□□□□□ -0.96
CDC39P25655 YHR056W-AYHR056W-A 435 nt9.08□□□□□ -0.96
CDC39P25655 HHO1YPL127C 777 nt9.08□□□□□ -0.96
CDC39P25655 YDR010CYDR010C 333 nt9.08□□□□□ -0.96
CDC39P25655 DAT1YML113W 747 nt9.07□□□□□ -0.96
CDC39P25655 XYL2YLR070C 1071 nt9.07□□□□□ -0.96
CDC39P25655 CAB5YDR196C 726 nt9.06□□□□□ -0.96
CDC39P25655 BNA2YJR078W 1362 nt9.04□□□□□ -0.96
CDC39P25655 SGT2YOR007C 1041 nt9.04□□□□□ -0.96
CDC39P25655 XDJ1YLR090W 1380 nt9.02□□□□□ -0.97
CDC39P25655 RBG1YAL036C 1110 nt9.01□□□□□ -0.97
CDC39P25655 RDN18-1RDN18-1 1800 nt9.01□□□□□ -0.97
CDC39P25655 RDN18-2RDN18-2 1800 nt9.01□□□□□ -0.97
CDC39P25655 AIM45YPR004C 1035 nt8.99□□□□□ -0.97
CDC39P25655 UME6YDR207C 2511 nt8.99□□□□□ -0.97
CDC39P25655 RAD51YER095W 1203 nt8.98□□□□□ -0.97
CDC39P25655 HSP60YLR259C 1719 nt8.97□□□□□ -0.97
CDC39P25655 NIT1YIL164C 600 nt8.96□□□□□ -0.98
CDC39P25655 RET2YFR051C 1641 nt8.92□□□□□ -0.98
CDC39P25655 AVT6YER119C 1347 nt8.92□□□□□ -0.98
CDC39P25655 GDH3YAL062W 1374 nt8.92□□□□□ -0.98
CDC39P25655 SHB17YKR043C 816 nt8.9□□□□□ -0.99
CDC39P25655 AQY2YLL052C 450 nt8.89□□□□□ -0.99
CDC39P25655 PAU7YAR020C 168 nt8.89□□□□□ -0.99
CDC39P25655 BOR1YNL275W 1731 nt8.89□□□□□ -0.99
CDC39P25655 FUR4YBR021W 1902 nt8.88□□□□□ -0.99
CDC39P25655 RPS14BYJL191W 417 nt8.87□□□□□ -0.99
CDC39P25655 GOR1YNL274C 1053 nt8.87□□□□□ -0.99
CDC39P25655 YGL034CYGL034C 366 nt8.86□□□□□ -0.99
CDC39P25655 YGR259CYGR259C 441 nt8.86□□□□□ -0.99
CDC39P25655 YKR005CYKR005C 1578 nt8.85□□□□□ -0.99
CDC39P25655 YCL074WYCL074W 927 nt8.85□□□□□ -0.99
CDC39P25655 COQ2YNR041C 1119 nt8.84□□□□□ -0.99
CDC39P25655 RAX1YOR301W 1308 nt8.82□□□□□ -1
CDC39P25655 DUT1YBR252W 444 nt8.82□□□□□ -1
CDC39P25655 STR3YGL184C 1398 nt8.82□□□□□ -1
CDC39P25655 SFA1YDL168W 1161 nt8.79□□□□□ -1
CDC39P25655 YHL019W-AYHL019W-A 594 nt8.78□□□□□ -1
CDC39P25655 PHO89YBR296C 1725 nt8.78□□□□□ -1
CDC39P25655 DPS1YLL018C 1674 nt8.78□□□□□ -1
CDC39P25655 NBP35YGL091C 987 nt8.76□□□□□ -1.01
CDC39P25655 SNF1YDR477W 1902 nt8.75□□□□□ -1.01
CDC39P25655 RTN2YDL204W 1182 nt8.74□□□□□ -1.01
CDC39P25655 RAD23YEL037C 1197 nt8.73□□□□□ -1.01
CDC39P25655 DUS1YML080W 1272 nt8.72□□□□□ -1.01
CDC39P25655 YCR102CYCR102C 1107 nt8.71□□□□□ -1.01
CDC39P25655 YLR437C-AYLR437C-A 228 nt8.71□□□□□ -1.01
CDC39P25655 YCR087WYCR087W 516 nt8.7□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms