Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24,44■■□□□ 1,5
Ctla4P09793 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Ctla4P09793 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24,42■■□□□ 1,5
Ctla4P09793 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24,41■■□□□ 1,5
Ctla4P09793 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24,41■■□□□ 1,5
Ctla4P09793 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Ctla4P09793 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Ctla4P09793 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Ctla4P09793 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Ctla4P09793 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24,36■■□□□ 1,49
Ctla4P09793 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24,35■■□□□ 1,49
Ctla4P09793 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24,35■■□□□ 1,49
Ctla4P09793 Peli2-204ENSMUST00000226513 1320 ntBASIC24,33■■□□□ 1,48
Ctla4P09793 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
Ctla4P09793 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24,32■■□□□ 1,48
Ctla4P09793 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24,32■■□□□ 1,48
Ctla4P09793 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
Ctla4P09793 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24,3■■□□□ 1,48
Ctla4P09793 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24,29■■□□□ 1,48
Ctla4P09793 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Ctla4P09793 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,28■■□□□ 1,48
Ctla4P09793 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,27■■□□□ 1,48
Ctla4P09793 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24,27■■□□□ 1,48
Ctla4P09793 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24,26■■□□□ 1,47
Ctla4P09793 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24,26■■□□□ 1,47
Ctla4P09793 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24,25■■□□□ 1,47
Ctla4P09793 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24,24■■□□□ 1,47
Ctla4P09793 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Ctla4P09793 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24,22■■□□□ 1,47
Ctla4P09793 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24,21■■□□□ 1,47
Ctla4P09793 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24,2■■□□□ 1,46
Ctla4P09793 Gm16148-201ENSMUST00000119653 893 ntBASIC24,18■■□□□ 1,46
Ctla4P09793 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24,16■■□□□ 1,46
Ctla4P09793 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24,16■■□□□ 1,46
Ctla4P09793 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24,14■■□□□ 1,45
Ctla4P09793 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24,12■■□□□ 1,45
Ctla4P09793 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Ctla4P09793 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24,11■■□□□ 1,45
Ctla4P09793 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Ctla4P09793 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Ctla4P09793 Gm2415-204ENSMUST00000190235 2004 ntBASIC24,1■■□□□ 1,45
Ctla4P09793 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24,1■■□□□ 1,45
Ctla4P09793 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24,1■■□□□ 1,45
Ctla4P09793 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,09■■□□□ 1,45
Ctla4P09793 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,45
Ctla4P09793 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24,08■■□□□ 1,45
Ctla4P09793 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24,07■■□□□ 1,44
Ctla4P09793 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24,05■■□□□ 1,44
Ctla4P09793 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Ctla4P09793 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24,04■■□□□ 1,44
Ctla4P09793 Zfp131-205ENSMUST00000223812 663 ntBASIC24,04■■□□□ 1,44
Ctla4P09793 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Ctla4P09793 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24■■□□□ 1,43
Ctla4P09793 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23,99■■□□□ 1,43
Ctla4P09793 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23,99■■□□□ 1,43
Ctla4P09793 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23,98■■□□□ 1,43
Ctla4P09793 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23,97■■□□□ 1,43
Ctla4P09793 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23,96■■□□□ 1,43
Ctla4P09793 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23,96■■□□□ 1,43
Ctla4P09793 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23,95■■□□□ 1,42
Ctla4P09793 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Ctla4P09793 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23,94■■□□□ 1,42
Ctla4P09793 Gm6658-202ENSMUST00000209493 1885 ntBASIC23,92■■□□□ 1,42
Ctla4P09793 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23,92■■□□□ 1,42
Ctla4P09793 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23,9■■□□□ 1,42
Ctla4P09793 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23,9■■□□□ 1,42
Ctla4P09793 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
Ctla4P09793 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23,88■■□□□ 1,41
Ctla4P09793 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23,88■■□□□ 1,41
Ctla4P09793 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Ctla4P09793 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Ctla4P09793 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23,87■■□□□ 1,41
Ctla4P09793 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23,87■■□□□ 1,41
Ctla4P09793 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23,86■■□□□ 1,41
Ctla4P09793 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Ctla4P09793 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23,85■■□□□ 1,41
Ctla4P09793 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,84■■□□□ 1,41
Ctla4P09793 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23,84■■□□□ 1,41
Ctla4P09793 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23,84■■□□□ 1,41
Ctla4P09793 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23,83■■□□□ 1,41
Ctla4P09793 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23,83■■□□□ 1,4
Ctla4P09793 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23,82■■□□□ 1,4
Ctla4P09793 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23,82■■□□□ 1,4
Ctla4P09793 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23,81■■□□□ 1,4
Ctla4P09793 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23,8■■□□□ 1,4
Ctla4P09793 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Ctla4P09793 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Ctla4P09793 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23,78■■□□□ 1,4
Ctla4P09793 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23,78■■□□□ 1,4
Ctla4P09793 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23,77■■□□□ 1,4
Ctla4P09793 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23,76■■□□□ 1,39
Ctla4P09793 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23,76■■□□□ 1,39
Ctla4P09793 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23,74■■□□□ 1,39
Ctla4P09793 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23,74■■□□□ 1,39
Ctla4P09793 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23,74■■□□□ 1,39
Ctla4P09793 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23,74■■□□□ 1,39
Ctla4P09793 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23,73■■□□□ 1,39
Ctla4P09793 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23,72■■□□□ 1,39
Ctla4P09793 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23,71■■□□□ 1,39
Ctla4P09793 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23,71■■□□□ 1,39
Retrieved 100 of 76,532 protein–RNA pairs in 24,1 ms