Protein–RNA interactions for Protein: O88507

Cntfr, Ciliary neurotrophic factor receptor subunit alpha, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfrO88507 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CntfrO88507 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.29■■□□□ 1
CntfrO88507 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.28■■□□□ 1
CntfrO88507 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CntfrO88507 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.26■□□□□ 0.99
CntfrO88507 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CntfrO88507 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CntfrO88507 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CntfrO88507 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CntfrO88507 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CntfrO88507 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CntfrO88507 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CntfrO88507 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CntfrO88507 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CntfrO88507 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.21■□□□□ 0.99
CntfrO88507 Peli2-204ENSMUST00000226513 1320 ntBASIC21.21■□□□□ 0.99
CntfrO88507 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CntfrO88507 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CntfrO88507 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.18■□□□□ 0.98
CntfrO88507 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CntfrO88507 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CntfrO88507 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CntfrO88507 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CntfrO88507 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CntfrO88507 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CntfrO88507 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CntfrO88507 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CntfrO88507 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CntfrO88507 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.1■□□□□ 0.97
CntfrO88507 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CntfrO88507 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CntfrO88507 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CntfrO88507 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CntfrO88507 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CntfrO88507 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CntfrO88507 Gm16148-201ENSMUST00000119653 893 ntBASIC21.04■□□□□ 0.96
CntfrO88507 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CntfrO88507 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.03■□□□□ 0.96
CntfrO88507 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CntfrO88507 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CntfrO88507 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CntfrO88507 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CntfrO88507 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21■□□□□ 0.95
CntfrO88507 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CntfrO88507 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CntfrO88507 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CntfrO88507 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CntfrO88507 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CntfrO88507 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CntfrO88507 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.92■□□□□ 0.94
CntfrO88507 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CntfrO88507 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CntfrO88507 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CntfrO88507 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.91■□□□□ 0.94
CntfrO88507 Zfp131-205ENSMUST00000223812 663 ntBASIC20.91■□□□□ 0.94
CntfrO88507 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CntfrO88507 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CntfrO88507 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CntfrO88507 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.88■□□□□ 0.93
CntfrO88507 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CntfrO88507 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CntfrO88507 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CntfrO88507 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CntfrO88507 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CntfrO88507 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CntfrO88507 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CntfrO88507 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.81■□□□□ 0.92
CntfrO88507 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CntfrO88507 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CntfrO88507 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.79■□□□□ 0.92
CntfrO88507 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CntfrO88507 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CntfrO88507 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.77■□□□□ 0.92
CntfrO88507 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CntfrO88507 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CntfrO88507 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.77■□□□□ 0.92
CntfrO88507 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CntfrO88507 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CntfrO88507 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CntfrO88507 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CntfrO88507 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CntfrO88507 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CntfrO88507 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.74■□□□□ 0.91
CntfrO88507 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.74■□□□□ 0.91
CntfrO88507 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CntfrO88507 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.73■□□□□ 0.91
CntfrO88507 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CntfrO88507 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CntfrO88507 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CntfrO88507 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CntfrO88507 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CntfrO88507 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CntfrO88507 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CntfrO88507 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CntfrO88507 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CntfrO88507 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CntfrO88507 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CntfrO88507 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CntfrO88507 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CntfrO88507 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms