Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Mmp8O70138 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Mmp8O70138 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Mmp8O70138 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.53■■■□□ 2.8
Mmp8O70138 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Mmp8O70138 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Mmp8O70138 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
Mmp8O70138 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Mmp8O70138 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.43■■■□□ 2.78
Mmp8O70138 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Mmp8O70138 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Mmp8O70138 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Mmp8O70138 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Mmp8O70138 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Mmp8O70138 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Mmp8O70138 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Mmp8O70138 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Mmp8O70138 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Mmp8O70138 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Mmp8O70138 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Mmp8O70138 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Mmp8O70138 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Mmp8O70138 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.76
Mmp8O70138 Gm24804-201ENSMUST00000174982 85 ntBASIC32.26■■■□□ 2.75
Mmp8O70138 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.25■■■□□ 2.75
Mmp8O70138 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.23■■■□□ 2.75
Mmp8O70138 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
Mmp8O70138 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Mmp8O70138 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
Mmp8O70138 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Mmp8O70138 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Mmp8O70138 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
Mmp8O70138 Peli2-204ENSMUST00000226513 1320 ntBASIC32.15■■■□□ 2.74
Mmp8O70138 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Mmp8O70138 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Mmp8O70138 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Mmp8O70138 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Mmp8O70138 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Mmp8O70138 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Mmp8O70138 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Mmp8O70138 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Mmp8O70138 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Mmp8O70138 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.02■■■□□ 2.72
Mmp8O70138 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
Mmp8O70138 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Mmp8O70138 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.99■■■□□ 2.71
Mmp8O70138 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Mmp8O70138 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Mmp8O70138 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
Mmp8O70138 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.96■■■□□ 2.71
Mmp8O70138 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Mmp8O70138 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Mmp8O70138 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Mmp8O70138 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.91■■■□□ 2.7
Mmp8O70138 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Mmp8O70138 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Mmp8O70138 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Mmp8O70138 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Mmp8O70138 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Mmp8O70138 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Mmp8O70138 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Mmp8O70138 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Mmp8O70138 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Mmp8O70138 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Mmp8O70138 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Mmp8O70138 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Mmp8O70138 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Mmp8O70138 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.79■■■□□ 2.68
Mmp8O70138 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Mmp8O70138 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Mmp8O70138 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Mmp8O70138 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
Mmp8O70138 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Mmp8O70138 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.7■■■□□ 2.67
Mmp8O70138 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Mmp8O70138 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Mmp8O70138 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Mmp8O70138 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Mmp8O70138 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Mmp8O70138 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Mmp8O70138 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Mmp8O70138 Gm16148-201ENSMUST00000119653 893 ntBASIC31.64■■■□□ 2.66
Mmp8O70138 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Mmp8O70138 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Mmp8O70138 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Mmp8O70138 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Mmp8O70138 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Mmp8O70138 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.63■■■□□ 2.65
Mmp8O70138 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Mmp8O70138 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.62■■■□□ 2.65
Mmp8O70138 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Mmp8O70138 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
Mmp8O70138 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.6■■■□□ 2.65
Mmp8O70138 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Mmp8O70138 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Mmp8O70138 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.57■■■□□ 2.64
Mmp8O70138 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.56■■■□□ 2.64
Mmp8O70138 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Mmp8O70138 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Mmp8O70138 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms