Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SncaO55042 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SncaO55042 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SncaO55042 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.32■■□□□ 1
SncaO55042 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SncaO55042 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.31■■□□□ 1
SncaO55042 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.31■■□□□ 1
SncaO55042 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SncaO55042 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SncaO55042 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SncaO55042 Gm25262-201ENSMUST00000174934 133 ntBASIC21.28■■□□□ 1
SncaO55042 Mipep-204ENSMUST00000225043 1548 ntBASIC21.27■■□□□ 1
SncaO55042 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SncaO55042 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SncaO55042 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SncaO55042 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SncaO55042 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SncaO55042 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.15■□□□□ 0.98
SncaO55042 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SncaO55042 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SncaO55042 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SncaO55042 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SncaO55042 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SncaO55042 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SncaO55042 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SncaO55042 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SncaO55042 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SncaO55042 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SncaO55042 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.08■□□□□ 0.97
SncaO55042 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SncaO55042 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SncaO55042 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SncaO55042 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SncaO55042 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SncaO55042 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SncaO55042 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SncaO55042 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.03■□□□□ 0.96
SncaO55042 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SncaO55042 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SncaO55042 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SncaO55042 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.01■□□□□ 0.95
SncaO55042 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SncaO55042 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SncaO55042 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SncaO55042 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SncaO55042 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SncaO55042 Zxda-201ENSMUST00000117281 2621 ntBASIC20.99■□□□□ 0.95
SncaO55042 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.99■□□□□ 0.95
SncaO55042 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SncaO55042 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaO55042 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SncaO55042 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SncaO55042 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SncaO55042 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SncaO55042 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SncaO55042 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaO55042 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SncaO55042 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaO55042 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SncaO55042 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SncaO55042 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.89■□□□□ 0.93
SncaO55042 Gm27322-201ENSMUST00000184007 104 ntBASIC20.89■□□□□ 0.93
SncaO55042 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SncaO55042 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SncaO55042 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SncaO55042 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SncaO55042 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SncaO55042 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SncaO55042 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.86■□□□□ 0.93
SncaO55042 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.86■□□□□ 0.93
SncaO55042 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SncaO55042 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SncaO55042 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SncaO55042 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.83■□□□□ 0.93
SncaO55042 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SncaO55042 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SncaO55042 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SncaO55042 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SncaO55042 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SncaO55042 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SncaO55042 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SncaO55042 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SncaO55042 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SncaO55042 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SncaO55042 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SncaO55042 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SncaO55042 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.76■□□□□ 0.91
SncaO55042 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SncaO55042 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SncaO55042 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SncaO55042 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SncaO55042 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SncaO55042 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.74■□□□□ 0.91
SncaO55042 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SncaO55042 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SncaO55042 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SncaO55042 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SncaO55042 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SncaO55042 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SncaO55042 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms