Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.57■■□□□ 1.36
Hps1O08983 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hps1O08983 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.57■■□□□ 1.36
Hps1O08983 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hps1O08983 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hps1O08983 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.55■■□□□ 1.36
Hps1O08983 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hps1O08983 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hps1O08983 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.53■■□□□ 1.36
Hps1O08983 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hps1O08983 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hps1O08983 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hps1O08983 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.5■■□□□ 1.35
Hps1O08983 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hps1O08983 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Hps1O08983 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hps1O08983 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hps1O08983 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hps1O08983 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hps1O08983 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Hps1O08983 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hps1O08983 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Hps1O08983 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hps1O08983 Zfp131-205ENSMUST00000223812 663 ntBASIC23.4■■□□□ 1.34
Hps1O08983 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.4■■□□□ 1.34
Hps1O08983 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hps1O08983 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.39■■□□□ 1.34
Hps1O08983 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Hps1O08983 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hps1O08983 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
Hps1O08983 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hps1O08983 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hps1O08983 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Hps1O08983 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hps1O08983 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Hps1O08983 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Hps1O08983 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hps1O08983 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.27■■□□□ 1.32
Hps1O08983 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hps1O08983 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hps1O08983 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Hps1O08983 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.25■■□□□ 1.31
Hps1O08983 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hps1O08983 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hps1O08983 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hps1O08983 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.21■■□□□ 1.31
Hps1O08983 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hps1O08983 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hps1O08983 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hps1O08983 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hps1O08983 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Hps1O08983 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hps1O08983 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hps1O08983 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hps1O08983 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hps1O08983 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Hps1O08983 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.13■■□□□ 1.29
Hps1O08983 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Hps1O08983 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.12■■□□□ 1.29
Hps1O08983 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Hps1O08983 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hps1O08983 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.11■■□□□ 1.29
Hps1O08983 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hps1O08983 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hps1O08983 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hps1O08983 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hps1O08983 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Hps1O08983 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hps1O08983 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.08■■□□□ 1.29
Hps1O08983 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hps1O08983 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hps1O08983 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hps1O08983 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hps1O08983 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hps1O08983 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.04■■□□□ 1.28
Hps1O08983 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hps1O08983 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Hps1O08983 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hps1O08983 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hps1O08983 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hps1O08983 Mipep-204ENSMUST00000225043 1548 ntBASIC22.99■■□□□ 1.27
Hps1O08983 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.99■■□□□ 1.27
Hps1O08983 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.99■■□□□ 1.27
Hps1O08983 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hps1O08983 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Hps1O08983 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hps1O08983 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hps1O08983 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Hps1O08983 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Hps1O08983 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Hps1O08983 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Hps1O08983 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Hps1O08983 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Hps1O08983 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Hps1O08983 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Hps1O08983 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Hps1O08983 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hps1O08983 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hps1O08983 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.92■■□□□ 1.26
Hps1O08983 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms