Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Mindy4b-psA0A1W2P7H6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Mindy4b-psA0A1W2P7H6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.86■■■□□ 2.05
Mindy4b-psA0A1W2P7H6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Mindy4b-psA0A1W2P7H6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.85■■■□□ 2.05
Mindy4b-psA0A1W2P7H6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Mindy4b-psA0A1W2P7H6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Mindy4b-psA0A1W2P7H6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Peli2-204ENSMUST00000226513 1320 ntBASIC27.82■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.8■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Mindy4b-psA0A1W2P7H6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
Mindy4b-psA0A1W2P7H6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Mindy4b-psA0A1W2P7H6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Mindy4b-psA0A1W2P7H6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Mindy4b-psA0A1W2P7H6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Mindy4b-psA0A1W2P7H6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.67■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.64■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
Mindy4b-psA0A1W2P7H6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Gm16148-201ENSMUST00000119653 893 ntBASIC27.6■■■□□ 2.01
Mindy4b-psA0A1W2P7H6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Mindy4b-psA0A1W2P7H6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Mindy4b-psA0A1W2P7H6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.54■■■□□ 2
Mindy4b-psA0A1W2P7H6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.52■■■□□ 2
Mindy4b-psA0A1W2P7H6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Mindy4b-psA0A1W2P7H6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Mindy4b-psA0A1W2P7H6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Mindy4b-psA0A1W2P7H6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.44■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.41■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Mindy4b-psA0A1W2P7H6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.37■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 Zfp131-205ENSMUST00000223812 663 ntBASIC27.36■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Mindy4b-psA0A1W2P7H6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.32■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.29■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Mindy4b-psA0A1W2P7H6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Mindy4b-psA0A1W2P7H6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.2■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.17■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.16■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.14■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.14■■□□□ 1.94
Mindy4b-psA0A1W2P7H6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms