Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav9d-1A0A075B699 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav9d-1A0A075B699 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav9d-1A0A075B699 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav9d-1A0A075B699 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav9d-1A0A075B699 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav9d-1A0A075B699 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav9d-1A0A075B699 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav9d-1A0A075B699 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav9d-1A0A075B699 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav9d-1A0A075B699 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav9d-1A0A075B699 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.9■□□□□ 0.78
Trav9d-1A0A075B699 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav9d-1A0A075B699 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav9d-1A0A075B699 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.87■□□□□ 0.77
Trav9d-1A0A075B699 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav9d-1A0A075B699 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav9d-1A0A075B699 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trav9d-1A0A075B699 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav9d-1A0A075B699 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav9d-1A0A075B699 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav9d-1A0A075B699 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Trav9d-1A0A075B699 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.83■□□□□ 0.77
Trav9d-1A0A075B699 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav9d-1A0A075B699 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trav9d-1A0A075B699 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav9d-1A0A075B699 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav9d-1A0A075B699 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav9d-1A0A075B699 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav9d-1A0A075B699 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav9d-1A0A075B699 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav9d-1A0A075B699 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav9d-1A0A075B699 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trav9d-1A0A075B699 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
Trav9d-1A0A075B699 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav9d-1A0A075B699 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav9d-1A0A075B699 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav9d-1A0A075B699 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav9d-1A0A075B699 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.72■□□□□ 0.75
Trav9d-1A0A075B699 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav9d-1A0A075B699 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav9d-1A0A075B699 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav9d-1A0A075B699 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trav9d-1A0A075B699 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.7■□□□□ 0.74
Trav9d-1A0A075B699 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.69■□□□□ 0.74
Trav9d-1A0A075B699 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav9d-1A0A075B699 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav9d-1A0A075B699 Gm27322-201ENSMUST00000184007 104 ntBASIC19.68■□□□□ 0.74
Trav9d-1A0A075B699 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav9d-1A0A075B699 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav9d-1A0A075B699 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav9d-1A0A075B699 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.65■□□□□ 0.74
Trav9d-1A0A075B699 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav9d-1A0A075B699 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trav9d-1A0A075B699 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav9d-1A0A075B699 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.64■□□□□ 0.73
Trav9d-1A0A075B699 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Trav9d-1A0A075B699 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Trav9d-1A0A075B699 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav9d-1A0A075B699 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Trav9d-1A0A075B699 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav9d-1A0A075B699 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav9d-1A0A075B699 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav9d-1A0A075B699 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav9d-1A0A075B699 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav9d-1A0A075B699 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav9d-1A0A075B699 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.59■□□□□ 0.73
Trav9d-1A0A075B699 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav9d-1A0A075B699 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav9d-1A0A075B699 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trav9d-1A0A075B699 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav9d-1A0A075B699 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav9d-1A0A075B699 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav9d-1A0A075B699 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trav9d-1A0A075B699 Zxda-201ENSMUST00000117281 2621 ntBASIC19.55■□□□□ 0.72
Trav9d-1A0A075B699 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav9d-1A0A075B699 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trav9d-1A0A075B699 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav9d-1A0A075B699 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav9d-1A0A075B699 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav9d-1A0A075B699 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav9d-1A0A075B699 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trav9d-1A0A075B699 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav9d-1A0A075B699 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.5■□□□□ 0.71
Trav9d-1A0A075B699 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav9d-1A0A075B699 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trav9d-1A0A075B699 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav9d-1A0A075B699 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav9d-1A0A075B699 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav9d-1A0A075B699 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.44■□□□□ 0.7
Trav9d-1A0A075B699 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav9d-1A0A075B699 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav9d-1A0A075B699 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav9d-1A0A075B699 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav9d-1A0A075B699 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav9d-1A0A075B699 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9d-1A0A075B699 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9d-1A0A075B699 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9d-1A0A075B699 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9d-1A0A075B699 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms