Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 TCAM1P-207ENST00000485295 1537 ntBASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 HSPA8P5-201ENST00000456928 2069 ntBASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 AGAP10P-201ENST00000454844 2418 ntBASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 AC020658.7-201ENST00000624274 2442 ntBASIC15.82■□□□□ 0.12
HDAC6Q9UBN7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC026410.1-201ENST00000507366 1101 ntBASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 AC064801.2-201ENST00000625052 1303 ntBASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HDAC6Q9UBN7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AC006987.1-201ENST00000413610 527 ntBASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HDAC6Q9UBN7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms