Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL132994.1-201ENST00000554098 400 ntBASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AL136370.1-201ENST00000608166 691 ntBASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 BRD7P5-201ENST00000299197 1822 ntBASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AL390755.1-201ENST00000623716 2027 ntBASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AC013726.1-201ENST00000563747 2285 ntBASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 AC010740.1-201ENST00000417035 684 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 RPSAP12-201ENST00000435879 888 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 HNRNPA1P73-201ENST00000446472 928 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 KRT18P62-201ENST00000446618 1287 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 RN7SL794P-201ENST00000469816 280 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 MARK2P17-201ENST00000498560 841 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 TLE2-205ENST00000586422 389 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 AL009176.1-201ENST00000607876 650 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 COG6-212ENST00000630730 186 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 DUX4L33-201ENST00000635217 958 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 AC138627.1-201ENST00000641127 1257 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CNTNAP3Q9BZ76 ODCP-201ENST00000459650 1639 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AC090616.6-203ENST00000579186 1945 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms