Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AC018755.1-201ENST00000601315 1182 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 MED25-209ENST00000612791 881 ntTSL 5 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 FAM90A22P-201ENST00000400142 1395 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 ZDHHC8P1-202ENST00000418264 1403 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 SRL-202ENST00000537996 1814 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 OARD1-214ENST00000486443 764 ntTSL 3 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 PEBP1P1-201ENST00000554856 510 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AC090950.1-202ENST00000605733 644 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 C2orf27AP1-201ENST00000618128 586 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AP006621.5-202ENST00000623692 636 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 AC106881.1-201ENST00000605849 3329 ntBASIC8.96□□□□□ -0.98
ALMS1Q8TCU4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 NLK-203ENST00000582037 1503 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC009238.3-201ENST00000512705 217 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 WSB1-213ENST00000583193 552 ntTSL 4 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 ARF1P2-201ENST00000392493 538 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 SRSF9P1-201ENST00000399149 530 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 KRT18P63-201ENST00000505463 979 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC233724.7-201ENST00000511476 253 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AC103706.1-201ENST00000561761 679 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 Z82244.1-201ENST00000631502 840 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 CICP4-201ENST00000447359 2812 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AL078621.2-201ENST00000419351 698 ntBASIC8.95□□□□□ -0.98
ALMS1Q8TCU4 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms