Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 HMGN1P4-201ENST00000419500 290 ntBASIC13.26□□□□□ -0.29
RIF1Q5UIP0 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 IGHV3OR16-11-201ENST00000565524 349 ntBASIC13.26□□□□□ -0.29
RIF1Q5UIP0 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 AC013472.3-201ENST00000607407 659 ntBASIC13.26□□□□□ -0.29
RIF1Q5UIP0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RIF1Q5UIP0 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 RPS15P5-201ENST00000449885 432 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 MTHFD2P7-201ENST00000483867 983 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 AC068134.4-201ENST00000613365 122 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 MDC1-209ENST00000613547 830 ntTSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 MIR7848-201ENST00000617402 101 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 AC138907.9-201ENST00000623747 986 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 KRT18P40-201ENST00000599859 1571 ntBASIC13.25□□□□□ -0.29
RIF1Q5UIP0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.25□□□□□ -0.29
RIF1Q5UIP0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AC116347.1-201ENST00000442824 720 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 RN7SL750P-201ENST00000582814 238 ntBASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC13.24□□□□□ -0.29
RIF1Q5UIP0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms