Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.7■□□□□ 0.1
CCNA1P78396 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.7■□□□□ 0.1
CCNA1P78396 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCNA1P78396 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNA1P78396 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.7■□□□□ 0.1
CCNA1P78396 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.7■□□□□ 0.1
CCNA1P78396 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNA1P78396 URB1-AS1-201ENST00000534991 831 ntBASIC15.7■□□□□ 0.1
CCNA1P78396 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNA1P78396 KF455155.1-201ENST00000604493 303 ntBASIC15.7■□□□□ 0.1
CCNA1P78396 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNA1P78396 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCNA1P78396 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CCNA1P78396 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCNA1P78396 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 AC008536.3-201ENST00000623282 1599 ntBASIC15.7■□□□□ 0.1
CCNA1P78396 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 AC040160.2-201ENST00000623816 1675 ntBASIC15.7■□□□□ 0.1
CCNA1P78396 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 RPL18AP16-201ENST00000424057 531 ntBASIC15.69■□□□□ 0.1
CCNA1P78396 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.69■□□□□ 0.1
CCNA1P78396 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 AP000533.1-201ENST00000456143 1177 ntBASIC15.69■□□□□ 0.1
CCNA1P78396 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNA1P78396 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNA1P78396 MIR6816-201ENST00000620368 66 ntBASIC15.69■□□□□ 0.1
CCNA1P78396 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CCNA1P78396 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNA1P78396 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCNA1P78396 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNA1P78396 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.68■□□□□ 0.1
CCNA1P78396 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCNA1P78396 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNA1P78396 SNORA57-201ENST00000383870 149 ntBASIC15.68■□□□□ 0.1
CCNA1P78396 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCNA1P78396 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNA1P78396 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.68■□□□□ 0.1
CCNA1P78396 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNA1P78396 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNA1P78396 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNA1P78396 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms