Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SEC61A1P61619 E2F3P2-201ENST00000447755 1422 ntBASIC12.36□□□□□ -0.43
SEC61A1P61619 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC61A1P61619 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.36□□□□□ -0.43
SEC61A1P61619 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SEC61A1P61619 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SEC61A1P61619 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 AC125807.2-201ENST00000513358 3514 ntBASIC12.35□□□□□ -0.43
SEC61A1P61619 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
SEC61A1P61619 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SEC61A1P61619 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SEC61A1P61619 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.35□□□□□ -0.43
SEC61A1P61619 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.35□□□□□ -0.43
SEC61A1P61619 AL354877.1-201ENST00000424412 413 ntBASIC12.35□□□□□ -0.43
SEC61A1P61619 POM121L10P-201ENST00000436994 1285 ntBASIC12.35□□□□□ -0.43
SEC61A1P61619 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.35□□□□□ -0.43
SEC61A1P61619 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.35□□□□□ -0.43
SEC61A1P61619 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
SEC61A1P61619 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.35□□□□□ -0.43
SEC61A1P61619 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 AC007663.3-201ENST00000609632 465 ntBASIC12.35□□□□□ -0.43
SEC61A1P61619 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.35□□□□□ -0.43
SEC61A1P61619 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.35□□□□□ -0.43
SEC61A1P61619 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.35□□□□□ -0.43
SEC61A1P61619 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SEC61A1P61619 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SEC61A1P61619 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 Z98257.2-202ENST00000641138 1548 ntBASIC12.34□□□□□ -0.43
SEC61A1P61619 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SEC61A1P61619 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.34□□□□□ -0.43
SEC61A1P61619 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 KRT8P13-201ENST00000463294 1010 ntBASIC12.34□□□□□ -0.43
SEC61A1P61619 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.34□□□□□ -0.43
SEC61A1P61619 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.34□□□□□ -0.43
SEC61A1P61619 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 AL451050.2-201ENST00000606967 682 ntBASIC12.34□□□□□ -0.43
SEC61A1P61619 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SEC61A1P61619 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.34□□□□□ -0.43
SEC61A1P61619 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.34□□□□□ -0.43
SEC61A1P61619 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SEC61A1P61619 SHC1P1-201ENST00000425230 1745 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms