Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 AL591122.2-201ENST00000624125 1853 ntBASIC13.62□□□□□ -0.23
GDF5P43026 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GDF5P43026 BX679664.3-201ENST00000414070 555 ntBASIC13.62□□□□□ -0.23
GDF5P43026 CYP46A4P-201ENST00000414953 267 ntBASIC13.62□□□□□ -0.23
GDF5P43026 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.62□□□□□ -0.23
GDF5P43026 AC113935.1-201ENST00000471722 555 ntBASIC13.62□□□□□ -0.23
GDF5P43026 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.62□□□□□ -0.23
GDF5P43026 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 AC079336.7-201ENST00000623428 1078 ntBASIC13.62□□□□□ -0.23
GDF5P43026 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
GDF5P43026 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF5P43026 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF5P43026 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GDF5P43026 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF5P43026 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
GDF5P43026 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.61□□□□□ -0.23
GDF5P43026 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 CICP20-201ENST00000443330 2801 ntBASIC13.61□□□□□ -0.23
GDF5P43026 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 ISCA2P1-201ENST00000425548 448 ntBASIC13.61□□□□□ -0.23
GDF5P43026 AC007274.1-201ENST00000439805 662 ntBASIC13.61□□□□□ -0.23
GDF5P43026 AL596276.2-201ENST00000447525 331 ntBASIC13.61□□□□□ -0.23
GDF5P43026 HIST2H2BC-201ENST00000498492 580 ntBASIC13.61□□□□□ -0.23
GDF5P43026 SLC25A15P3-201ENST00000505530 290 ntBASIC13.61□□□□□ -0.23
GDF5P43026 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.61□□□□□ -0.23
GDF5P43026 RN7SL774P-201ENST00000577467 290 ntBASIC13.61□□□□□ -0.23
GDF5P43026 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
GDF5P43026 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.61□□□□□ -0.23
GDF5P43026 AC091544.8-201ENST00000619490 361 ntBASIC13.61□□□□□ -0.23
GDF5P43026 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.61□□□□□ -0.23
GDF5P43026 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GDF5P43026 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 AC020763.3-201ENST00000625095 2904 ntBASIC13.61□□□□□ -0.23
GDF5P43026 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GDF5P43026 MARK2P16-201ENST00000605714 1723 ntBASIC13.61□□□□□ -0.23
GDF5P43026 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF5P43026 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
GDF5P43026 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms