Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLCN1P35523 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.96■□□□□ 0.15
CLCN1P35523 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN1P35523 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CLCN1P35523 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN1P35523 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN1P35523 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLCN1P35523 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CLCN1P35523 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CLCN1P35523 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 CTAGE13P-201ENST00000416709 2446 ntBASIC15.95■□□□□ 0.14
CLCN1P35523 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 MICA-210ENST00000616296 2260 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CLCN1P35523 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.95■□□□□ 0.14
CLCN1P35523 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 AC007389.4-201ENST00000454674 793 ntBASIC15.95■□□□□ 0.14
CLCN1P35523 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 SLC25A47P1-201ENST00000531577 414 ntBASIC15.95■□□□□ 0.14
CLCN1P35523 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLCN1P35523 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 AC138696.2-201ENST00000607376 223 ntBASIC15.95■□□□□ 0.14
CLCN1P35523 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.95■□□□□ 0.14
CLCN1P35523 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCN1P35523 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCN1P35523 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CLCN1P35523 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN1P35523 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 AC015688.4-201ENST00000580780 1647 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 AL022313.4-201ENST00000562756 2046 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN1P35523 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 AC092933.1-201ENST00000393644 945 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN1P35523 TMEM14DP-201ENST00000422205 345 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN1P35523 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN1P35523 AC011495.1-201ENST00000498085 584 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.94■□□□□ 0.14
CLCN1P35523 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.94■□□□□ 0.14
CLCN1P35523 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN1P35523 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN1P35523 AC025279.2-201ENST00000569730 653 ntBASIC15.94■□□□□ 0.14
CLCN1P35523 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms