Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL157996.1-201ENST00000624684 2299 ntBASIC14.15□□□□□ -0.14
VCLP18206 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.15□□□□□ -0.15
VCLP18206 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
VCLP18206 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 AC008132.1-202ENST00000342005 1389 ntBASIC14.14□□□□□ -0.15
VCLP18206 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VCLP18206 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 ACTG1P2-201ENST00000415776 1125 ntBASIC14.14□□□□□ -0.15
VCLP18206 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 ACTG1P11-201ENST00000425411 1125 ntBASIC14.14□□□□□ -0.15
VCLP18206 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.14□□□□□ -0.15
VCLP18206 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.14□□□□□ -0.15
VCLP18206 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.14□□□□□ -0.15
VCLP18206 MIR3619-201ENST00000579667 83 ntBASIC14.14□□□□□ -0.15
VCLP18206 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.14□□□□□ -0.15
VCLP18206 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.14□□□□□ -0.15
VCLP18206 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.14□□□□□ -0.15
VCLP18206 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.14□□□□□ -0.15
VCLP18206 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.14□□□□□ -0.15
VCLP18206 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
VCLP18206 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VCLP18206 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCLP18206 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
VCLP18206 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.13□□□□□ -0.15
VCLP18206 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.13□□□□□ -0.15
VCLP18206 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.13□□□□□ -0.15
VCLP18206 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.13□□□□□ -0.15
VCLP18206 AC012618.1-201ENST00000461223 412 ntBASIC14.13□□□□□ -0.15
VCLP18206 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 AC245884.6-201ENST00000515672 1067 ntBASIC14.13□□□□□ -0.15
VCLP18206 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.13□□□□□ -0.15
VCLP18206 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.13□□□□□ -0.15
VCLP18206 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VCLP18206 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VCLP18206 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms