Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.76□□□□□ -0.53
CD74P04233 ACTG1P3-201ENST00000431775 1114 ntBASIC11.76□□□□□ -0.53
CD74P04233 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 RFPL4AP1-201ENST00000530883 850 ntBASIC11.76□□□□□ -0.53
CD74P04233 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.76□□□□□ -0.53
CD74P04233 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.76□□□□□ -0.53
CD74P04233 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 GNRHR2-203ENST00000581100 1187 ntBASIC11.76□□□□□ -0.53
CD74P04233 AP001462.1-201ENST00000594089 452 ntBASIC11.76□□□□□ -0.53
CD74P04233 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 AC008764.8-201ENST00000623966 2717 ntBASIC11.76□□□□□ -0.53
CD74P04233 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
CD74P04233 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CD74P04233 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CD74P04233 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.75□□□□□ -0.53
CD74P04233 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 COX5BP1-201ENST00000507622 393 ntBASIC11.75□□□□□ -0.53
CD74P04233 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.75□□□□□ -0.53
CD74P04233 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.75□□□□□ -0.53
CD74P04233 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 DUX4L46-201ENST00000566845 751 ntBASIC11.75□□□□□ -0.53
CD74P04233 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.75□□□□□ -0.53
CD74P04233 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.75□□□□□ -0.53
CD74P04233 ZACNP1-201ENST00000612259 710 ntBASIC11.75□□□□□ -0.53
CD74P04233 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CD74P04233 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 AL139424.3-202ENST00000641619 917 ntBASIC11.75□□□□□ -0.53
CD74P04233 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CD74P04233 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD74P04233 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.75□□□□□ -0.53
CD74P04233 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms