Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.11□□□□□ -0.15
GPC4O75487 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
GPC4O75487 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
GPC4O75487 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 NUTM2HP-201ENST00000442076 2498 ntBASIC14.1□□□□□ -0.15
GPC4O75487 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.1□□□□□ -0.15
GPC4O75487 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
GPC4O75487 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.1□□□□□ -0.15
GPC4O75487 AC125604.1-201ENST00000496255 707 ntBASIC14.1□□□□□ -0.15
GPC4O75487 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.1□□□□□ -0.15
GPC4O75487 AP001258.2-201ENST00000529891 490 ntBASIC14.1□□□□□ -0.15
GPC4O75487 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.1□□□□□ -0.15
GPC4O75487 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 AL157813.1-201ENST00000612996 587 ntBASIC14.1□□□□□ -0.15
GPC4O75487 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 MAPK10-262ENST00000641051 5738 ntBASIC14.1□□□□□ -0.15
GPC4O75487 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.1□□□□□ -0.15
GPC4O75487 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.1□□□□□ -0.15
GPC4O75487 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GPC4O75487 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
GPC4O75487 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GPC4O75487 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GPC4O75487 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.09□□□□□ -0.15
GPC4O75487 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.09□□□□□ -0.15
GPC4O75487 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
GPC4O75487 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.09□□□□□ -0.15
GPC4O75487 KRT18P15-201ENST00000458108 1291 ntBASIC14.09□□□□□ -0.15
GPC4O75487 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
GPC4O75487 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.09□□□□□ -0.15
GPC4O75487 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.09□□□□□ -0.15
GPC4O75487 AL645939.5-201ENST00000606834 243 ntBASIC14.09□□□□□ -0.15
GPC4O75487 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GPC4O75487 AC007952.5-201ENST00000572818 1486 ntBASIC14.09□□□□□ -0.15
GPC4O75487 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPC4O75487 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.09□□□□□ -0.15
GPC4O75487 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms