Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 AC106782.5-201ENST00000616011 337 ntBASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 FAM90A12P-201ENST00000519497 2375 ntBASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 FAM90A24P-201ENST00000520792 2369 ntBASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
SHANK2Q9UPX8 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 SIGLEC20P-201ENST00000595243 1311 ntBASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 DDX11L8-201ENST00000535849 366 ntBASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 GAPDHP29-201ENST00000429913 985 ntBASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC105443.1-201ENST00000433754 712 ntBASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AC139100.2-201ENST00000616901 662 ntBASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHANK2Q9UPX8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 LINC00638-201ENST00000555578 2518 ntBASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 PMF1-201ENST00000368273 884 ntTSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 KRT8P6-201ENST00000399259 1207 ntBASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 RBMX2P5-201ENST00000424312 969 ntBASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHANK2Q9UPX8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms