Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR8T1P-201ENST00000421347 918 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 SERPINA13P-202ENST00000478994 924 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 AC044849.1-201ENST00000519737 1188 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 AC013355.1-201ENST00000562625 723 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 AL022334.2-201ENST00000610000 484 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 PPP1R26P2-201ENST00000611403 3595 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 RNA5SP359-201ENST00000364838 113 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SNORA50C-201ENST00000408535 133 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 IGHJ2P-201ENST00000454480 60 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC106794.1-201ENST00000506935 792 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC079328.1-201ENST00000560358 952 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SNORA50.1-201ENST00000628590 135 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 AC020917.4-201ENST00000623994 1999 ntBASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.73■□□□□ 0.27
UPF3BQ9BZI7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 PCDHB18P-202ENST00000526308 3197 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC138969.2-201ENST00000532739 9932 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 NKAIN1P1-201ENST00000435754 582 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 RCC2P8-201ENST00000502779 1035 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC005740.2-201ENST00000511085 419 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AL118558.3-201ENST00000607414 1079 ntBASIC16.72■□□□□ 0.27
UPF3BQ9BZI7 AC015967.2-201ENST00000624092 234 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms