Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
VGLL1Q99990 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 AC244394.1-201ENST00000435000 1665 ntBASIC10.69□□□□□ -0.7
VGLL1Q99990 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC10.69□□□□□ -0.7
VGLL1Q99990 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 AL590824.1-201ENST00000403828 1349 ntBASIC10.69□□□□□ -0.7
VGLL1Q99990 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.69□□□□□ -0.7
VGLL1Q99990 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.69□□□□□ -0.7
VGLL1Q99990 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.69□□□□□ -0.7
VGLL1Q99990 TMEM14DP-201ENST00000422205 345 ntBASIC10.69□□□□□ -0.7
VGLL1Q99990 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.69□□□□□ -0.7
VGLL1Q99990 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.69□□□□□ -0.7
VGLL1Q99990 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC10.69□□□□□ -0.7
VGLL1Q99990 AHRR-211ENST00000515206 462 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 C2orf69P2-201ENST00000562032 1123 ntBASIC10.69□□□□□ -0.7
VGLL1Q99990 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 BTNL10-201ENST00000595971 695 ntBASIC10.69□□□□□ -0.7
VGLL1Q99990 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC10.69□□□□□ -0.7
VGLL1Q99990 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 SALL4P6-201ENST00000429385 1691 ntBASIC10.69□□□□□ -0.7
VGLL1Q99990 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VGLL1Q99990 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.69□□□□□ -0.7
VGLL1Q99990 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VGLL1Q99990 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
VGLL1Q99990 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
VGLL1Q99990 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AHCYP2-201ENST00000430630 1300 ntBASIC10.68□□□□□ -0.7
VGLL1Q99990 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms