Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDK5RAP3Q96JB5 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 NCLP1-201ENST00000445357 1963 ntBASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AC073869.2-201ENST00000417338 1026 ntBASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AC006335.1-201ENST00000445200 547 ntBASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 SLC25A15P3-201ENST00000505530 290 ntBASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 MIR497HG-202ENST00000572453 3838 ntBASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AL021707.6-201ENST00000609212 491 ntBASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.82■□□□□ 0.12
CDK5RAP3Q96JB5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC008132.1-202ENST00000342005 1389 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 BANF1P3-201ENST00000412556 261 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC073869.1-201ENST00000415574 2762 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 CALR4P-201ENST00000431943 946 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC005077.2-201ENST00000449786 690 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC073150.1-201ENST00000450406 1084 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC008723.1-201ENST00000506922 207 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC008620.2-201ENST00000510294 1569 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC116345.2-201ENST00000512837 523 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 RN7SL455P-201ENST00000580629 282 ntBASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.81■□□□□ 0.12
CDK5RAP3Q96JB5 KRT18P9-201ENST00000604826 1300 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms