Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AP003171.2-201ENST00000528208 925 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AC078819.1-201ENST00000547454 765 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AC012085.1-201ENST00000548270 765 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AC233724.13-201ENST00000598383 410 ntBASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC107Q8WV48 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AL928654.5-201ENST00000624831 2501 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 KRT8P28-201ENST00000433288 1390 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AC115284.2-201ENST00000624646 2054 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AL512384.1-201ENST00000406683 331 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 CD8B2-202ENST00000417670 633 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AC007551.1-201ENST00000457394 519 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 BTNL10-201ENST00000595971 695 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 KRT8P4-201ENST00000509735 1454 ntBASIC12.19□□□□□ -0.46
CCDC107Q8WV48 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms