Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AL133517.1-201ENST00000413412 748 ntBASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 HLA-DRB6-202ENST00000437183 1090 ntBASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TSACC-206ENST00000466306 477 ntTSL 3 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 LINC00643-207ENST00000637212 734 ntBASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL22A1Q8NFW1 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AC253536.1-201ENST00000437021 315 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 GAPDHP76-201ENST00000512278 976 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AZU1P1-201ENST00000603479 385 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 FAM45BP-202ENST00000592932 1624 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 AC110753.1-201ENST00000505711 1022 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 DNM1P17-201ENST00000512082 426 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 RN7SKP195-201ENST00000516587 303 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL22A1Q8NFW1 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 MIR602-201ENST00000384960 98 ntBASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 OARD1-214ENST00000486443 764 ntTSL 3 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 SLC25A5P6-201ENST00000515328 886 ntBASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 AC080023.2-201ENST00000532615 208 ntBASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 MED25-209ENST00000612791 881 ntTSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 UBR1-212ENST00000627960 189 ntTSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL22A1Q8NFW1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL22A1Q8NFW1 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL22A1Q8NFW1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms