Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AC138701.2-201ENST00000553634 226 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 AL512430.1-201ENST00000392575 860 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 ERP29P1-201ENST00000442902 706 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 FTLP1-201ENST00000449155 526 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 AC130709.1-201ENST00000484779 1212 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 MRPL22P1-201ENST00000505398 616 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 AC145285.5-201ENST00000562217 361 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 KRT18P8-201ENST00000581937 1246 ntBASIC13.43□□□□□ -0.26
RNF44Q7L0R7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
RNF44Q7L0R7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AC074138.1-201ENST00000611182 1303 ntBASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 TBC1D27-202ENST00000424239 1573 ntBASIC13.42□□□□□ -0.26
RNF44Q7L0R7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 PYY2-201ENST00000315776 282 ntBASIC13.42□□□□□ -0.26
RNF44Q7L0R7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AP000356.3-201ENST00000382243 753 ntBASIC13.42□□□□□ -0.26
RNF44Q7L0R7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AC018638.5-201ENST00000450885 754 ntBASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.42□□□□□ -0.26
RNF44Q7L0R7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms