Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC061965.1-201ENST00000560524 1465 ntBASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 MIR339-201ENST00000362153 94 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 KRT18P33-201ENST00000398525 1043 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 MED15P3-201ENST00000413613 326 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 MAGEA7P-201ENST00000436482 942 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC008494.1-201ENST00000497612 796 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC099328.1-201ENST00000498809 1030 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC093700.1-201ENST00000503348 717 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 GPX3-202ENST00000517973 612 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC123912.6-201ENST00000612657 315 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC012617.1-204ENST00000586340 2305 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 AC093462.1-201ENST00000621167 1683 ntBASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD4Q5XG99 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 AC015656.1-201ENST00000624209 3578 ntBASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.52□□□□□ -0.24
LYSMD4Q5XG99 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 NQO2-204ENST00000380454 851 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AL359092.2-201ENST00000423330 585 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 FDPSP7-201ENST00000429043 1054 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 CDK4P1-201ENST00000454213 828 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 PEBP1P3-201ENST00000455475 548 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 RN7SL578P-201ENST00000477781 283 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC026412.1-206ENST00000502273 206 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 SRPK2P-201ENST00000523408 1100 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD4Q5XG99 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms