Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 AC244394.1-201ENST00000435000 1665 ntBASIC14.7□□□□□ -0.06
IRX4P78413 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 FAM90A7P-201ENST00000382628 1395 ntBASIC14.7□□□□□ -0.06
IRX4P78413 FAM90A23P-201ENST00000400136 1395 ntBASIC14.7□□□□□ -0.06
IRX4P78413 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 AC023794.5-201ENST00000564380 2157 ntBASIC14.7□□□□□ -0.06
IRX4P78413 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.69□□□□□ -0.06
IRX4P78413 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
IRX4P78413 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.69□□□□□ -0.06
IRX4P78413 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.69□□□□□ -0.06
IRX4P78413 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 AP000356.3-201ENST00000382243 753 ntBASIC14.69□□□□□ -0.06
IRX4P78413 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.69□□□□□ -0.06
IRX4P78413 RN7SL258P-201ENST00000478664 300 ntBASIC14.69□□□□□ -0.06
IRX4P78413 RN7SL67P-201ENST00000492147 296 ntBASIC14.69□□□□□ -0.06
IRX4P78413 CTBP2P4-201ENST00000513884 920 ntBASIC14.69□□□□□ -0.06
IRX4P78413 AP002803.1-201ENST00000528836 498 ntBASIC14.69□□□□□ -0.06
IRX4P78413 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.69□□□□□ -0.06
IRX4P78413 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.69□□□□□ -0.06
IRX4P78413 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.69□□□□□ -0.06
IRX4P78413 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.69□□□□□ -0.06
IRX4P78413 TCAM1P-207ENST00000485295 1537 ntBASIC14.69□□□□□ -0.06
IRX4P78413 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.69□□□□□ -0.06
IRX4P78413 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
IRX4P78413 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.69□□□□□ -0.06
IRX4P78413 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
IRX4P78413 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IRX4P78413 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IRX4P78413 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.68□□□□□ -0.06
IRX4P78413 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.68□□□□□ -0.06
IRX4P78413 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 PCDHA5-203ENST00000614258 4248 ntBASIC14.68□□□□□ -0.06
IRX4P78413 AC011840.2-201ENST00000563063 1520 ntBASIC14.68□□□□□ -0.06
IRX4P78413 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.68□□□□□ -0.06
IRX4P78413 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.68□□□□□ -0.06
IRX4P78413 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IRX4P78413 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.68□□□□□ -0.06
IRX4P78413 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
IRX4P78413 DNM1P30-201ENST00000563586 452 ntBASIC14.68□□□□□ -0.06
IRX4P78413 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.68□□□□□ -0.06
IRX4P78413 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.68□□□□□ -0.06
IRX4P78413 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
IRX4P78413 AC138894.2-201ENST00000602838 371 ntBASIC14.68□□□□□ -0.06
IRX4P78413 AC138696.2-201ENST00000607376 223 ntBASIC14.68□□□□□ -0.06
IRX4P78413 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IRX4P78413 AC242376.2-201ENST00000619355 883 ntBASIC14.68□□□□□ -0.06
IRX4P78413 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.68□□□□□ -0.06
IRX4P78413 FAM90A2P-201ENST00000511144 1395 ntBASIC14.68□□□□□ -0.06
IRX4P78413 FAM90A25P-201ENST00000528404 1395 ntBASIC14.68□□□□□ -0.06
IRX4P78413 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms