Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CCNA1P78396 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 AF013593.1-201ENST00000458074 1487 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 AC015656.1-201ENST00000624209 3578 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC15.72■□□□□ 0.11
CCNA1P78396 RPSAP70-201ENST00000504462 864 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 KRT8P34-201ENST00000577607 1044 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC15.72■□□□□ 0.11
CCNA1P78396 RN7SL524P-201ENST00000581152 300 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 AC011462.4-201ENST00000616866 449 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.72■□□□□ 0.11
CCNA1P78396 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CCNA1P78396 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.72■□□□□ 0.11
CCNA1P78396 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 AC064850.1-201ENST00000413279 1398 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNA1P78396 TNRC18P2-201ENST00000417666 2714 ntBASIC15.72■□□□□ 0.11
CCNA1P78396 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNA1P78396 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNA1P78396 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCNA1P78396 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNA1P78396 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCNA1P78396 EEF1DP5-201ENST00000431410 772 ntBASIC15.71■□□□□ 0.11
CCNA1P78396 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.71■□□□□ 0.11
CCNA1P78396 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.71■□□□□ 0.11
CCNA1P78396 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNA1P78396 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.71■□□□□ 0.11
CCNA1P78396 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNA1P78396 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNA1P78396 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.71■□□□□ 0.11
CCNA1P78396 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNA1P78396 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNA1P78396 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNA1P78396 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 KRT8P42-201ENST00000405771 1399 ntBASIC15.71■□□□□ 0.11
CCNA1P78396 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNA1P78396 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNA1P78396 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCNA1P78396 KRT8P25-201ENST00000473150 1456 ntBASIC15.71■□□□□ 0.1
CCNA1P78396 FAM226B-201ENST00000602508 1490 ntBASIC15.71■□□□□ 0.1
CCNA1P78396 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNA1P78396 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CCNA1P78396 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCNA1P78396 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.71■□□□□ 0.1
CCNA1P78396 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
CCNA1P78396 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNA1P78396 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCNA1P78396 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNA1P78396 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCNA1P78396 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms