Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NKX2-5P52952 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NKX2-5P52952 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NKX2-5P52952 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NKX2-5P52952 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 IER3-202ENST00000376377 1350 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.81□□□□□ -0.52
NKX2-5P52952 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.81□□□□□ -0.52
NKX2-5P52952 SCARNA2-201ENST00000458748 420 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.81□□□□□ -0.52
NKX2-5P52952 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.81□□□□□ -0.52
NKX2-5P52952 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.81□□□□□ -0.52
NKX2-5P52952 AC012615.1-201ENST00000565797 1299 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 AC138761.1-201ENST00000584393 385 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 AL356488.2-201ENST00000602755 427 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.81□□□□□ -0.52
NKX2-5P52952 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 LRRC37A7P-201ENST00000583900 2759 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-5P52952 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.81□□□□□ -0.52
NKX2-5P52952 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-5P52952 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 IL9RP3-201ENST00000442856 1674 ntBASIC11.81□□□□□ -0.52
NKX2-5P52952 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-5P52952 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 MARK2P16-201ENST00000605714 1723 ntBASIC11.8□□□□□ -0.52
NKX2-5P52952 AL353593.1-201ENST00000602517 3955 ntBASIC11.8□□□□□ -0.52
NKX2-5P52952 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NKX2-5P52952 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-5P52952 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-5P52952 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-5P52952 IGLL3P-201ENST00000412472 434 ntBASIC11.8□□□□□ -0.52
NKX2-5P52952 TLE1P1-201ENST00000422965 589 ntBASIC11.8□□□□□ -0.52
NKX2-5P52952 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-5P52952 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 AL049597.2-201ENST00000565575 961 ntBASIC11.8□□□□□ -0.52
NKX2-5P52952 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-5P52952 AC027307.2-201ENST00000591252 911 ntBASIC11.8□□□□□ -0.52
NKX2-5P52952 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-5P52952 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-5P52952 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms