Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNA5SP406-201ENST00000516106 112 ntBASIC13.06□□□□□ -0.32
EFNA3P52797 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNA3P52797 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.06□□□□□ -0.32
EFNA3P52797 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNA3P52797 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
EFNA3P52797 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNA3P52797 AC140113.1-201ENST00000603467 169 ntBASIC13.06□□□□□ -0.32
EFNA3P52797 AP000322.3-201ENST00000608665 388 ntBASIC13.06□□□□□ -0.32
EFNA3P52797 LINC00244-201ENST00000625073 613 ntBASIC13.06□□□□□ -0.32
EFNA3P52797 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.06□□□□□ -0.32
EFNA3P52797 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNA3P52797 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
EFNA3P52797 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
EFNA3P52797 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
EFNA3P52797 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
EFNA3P52797 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.06□□□□□ -0.32
EFNA3P52797 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EFNA3P52797 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
EFNA3P52797 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 AC117503.4-201ENST00000623229 1418 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 AC061965.1-201ENST00000560524 1465 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 AC005014.1-201ENST00000432006 2976 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 AC004837.1-201ENST00000446267 564 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
EFNA3P52797 AC025186.1-201ENST00000478174 870 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 IGHV3-37-201ENST00000518544 340 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.05□□□□□ -0.32
EFNA3P52797 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.05□□□□□ -0.32
EFNA3P52797 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.05□□□□□ -0.32
EFNA3P52797 SNORD3B-1-201ENST00000577988 758 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 AC132825.4-202ENST00000578792 434 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 AP005264.5-201ENST00000590066 467 ntBASIC13.05□□□□□ -0.32
EFNA3P52797 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.05□□□□□ -0.32
EFNA3P52797 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.05□□□□□ -0.32
EFNA3P52797 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
EFNA3P52797 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
EFNA3P52797 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EFNA3P52797 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNA3P52797 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 AC023794.5-201ENST00000564380 2157 ntBASIC13.04□□□□□ -0.32
EFNA3P52797 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA3P52797 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
EFNA3P52797 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms