Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 AL008718.2-201ENST00000609206 1313 ntBASIC12.83□□□□□ -0.36
CENPAP49450 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.83□□□□□ -0.36
CENPAP49450 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CENPAP49450 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CENPAP49450 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.83□□□□□ -0.36
CENPAP49450 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 AL928654.5-201ENST00000624831 2501 ntBASIC12.83□□□□□ -0.36
CENPAP49450 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CENPAP49450 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CENPAP49450 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 AC026954.1-201ENST00000429771 1293 ntBASIC12.82□□□□□ -0.36
CENPAP49450 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.82□□□□□ -0.36
CENPAP49450 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.82□□□□□ -0.36
CENPAP49450 AC100850.1-201ENST00000506768 649 ntBASIC12.82□□□□□ -0.36
CENPAP49450 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.82□□□□□ -0.36
CENPAP49450 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
CENPAP49450 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 C2orf69P2-201ENST00000562032 1123 ntBASIC12.82□□□□□ -0.36
CENPAP49450 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 CR392039.2-201ENST00000623182 509 ntBASIC12.82□□□□□ -0.36
CENPAP49450 AC105233.6-201ENST00000642093 218 ntBASIC12.82□□□□□ -0.36
CENPAP49450 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CENPAP49450 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CENPAP49450 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CENPAP49450 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CENPAP49450 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CENPAP49450 AC106818.1-201ENST00000623223 3242 ntBASIC12.81□□□□□ -0.36
CENPAP49450 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.81□□□□□ -0.36
CENPAP49450 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.81□□□□□ -0.36
CENPAP49450 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CENPAP49450 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms