Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 MESTP3-201ENST00000503460 968 ntBASIC15.98■□□□□ 0.15
CLCN1P35523 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.98■□□□□ 0.15
CLCN1P35523 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
CLCN1P35523 AC121493.1-201ENST00000602316 450 ntBASIC15.98■□□□□ 0.15
CLCN1P35523 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLCN1P35523 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.98■□□□□ 0.15
CLCN1P35523 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLCN1P35523 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.97■□□□□ 0.15
CLCN1P35523 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 AC245100.3-201ENST00000441281 285 ntBASIC15.97■□□□□ 0.15
CLCN1P35523 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 AL596325.1-201ENST00000563991 1082 ntBASIC15.97■□□□□ 0.15
CLCN1P35523 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.97■□□□□ 0.15
CLCN1P35523 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLCN1P35523 ENPP7P14-201ENST00000621765 1040 ntBASIC15.97■□□□□ 0.15
CLCN1P35523 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CLCN1P35523 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLCN1P35523 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC15.97■□□□□ 0.15
CLCN1P35523 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLCN1P35523 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 TNKS-213ENST00000522110 2900 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN1P35523 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN1P35523 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLCN1P35523 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 INE1-201ENST00000456273 945 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 RN7SL692P-201ENST00000464677 288 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 USP32P1-208ENST00000506594 1164 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.96■□□□□ 0.15
CLCN1P35523 AC131206.1-201ENST00000538078 1211 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 AC132938.2-201ENST00000579188 680 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 AC027307.3-201ENST00000594262 1100 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLCN1P35523 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
CLCN1P35523 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.96■□□□□ 0.15
CLCN1P35523 AL591163.1-201ENST00000641757 987 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 AC020910.5-201ENST00000623668 1865 ntBASIC15.96■□□□□ 0.15
CLCN1P35523 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLCN1P35523 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms