Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.34■□□□□ 0.53
USP6P35125 SNRPD2P2-201ENST00000473818 333 ntBASIC18.34■□□□□ 0.53
USP6P35125 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 CTBP2P6-201ENST00000526402 1229 ntBASIC18.34■□□□□ 0.53
USP6P35125 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC18.34■□□□□ 0.53
USP6P35125 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
USP6P35125 AP001462.1-201ENST00000594089 452 ntBASIC18.34■□□□□ 0.53
USP6P35125 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC18.34■□□□□ 0.53
USP6P35125 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC18.34■□□□□ 0.53
USP6P35125 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.34■□□□□ 0.53
USP6P35125 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 PI4KAP2-201ENST00000360806 2080 ntBASIC18.34■□□□□ 0.53
USP6P35125 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP6P35125 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP6P35125 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 ZSCAN5DP-201ENST00000600684 1488 ntBASIC18.34■□□□□ 0.53
USP6P35125 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC18.34■□□□□ 0.53
USP6P35125 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP6P35125 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP6P35125 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
USP6P35125 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP6P35125 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP6P35125 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP6P35125 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.33■□□□□ 0.53
USP6P35125 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.33■□□□□ 0.53
USP6P35125 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP6P35125 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 JPT2-214ENST00000569765 782 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 AP001120.3-201ENST00000585729 489 ntBASIC18.33■□□□□ 0.53
USP6P35125 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC18.33■□□□□ 0.53
USP6P35125 AC106782.5-201ENST00000616011 337 ntBASIC18.33■□□□□ 0.53
USP6P35125 AC139749.1-202ENST00000617529 3139 ntBASIC18.33■□□□□ 0.53
USP6P35125 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP6P35125 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP6P35125 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.33■□□□□ 0.53
USP6P35125 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC18.33■□□□□ 0.53
USP6P35125 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
USP6P35125 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP6P35125 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC18.33■□□□□ 0.52
USP6P35125 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC18.33■□□□□ 0.52
USP6P35125 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.33■□□□□ 0.52
USP6P35125 CR383656.2-201ENST00000548656 2254 ntBASIC18.33■□□□□ 0.52
USP6P35125 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP6P35125 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.33■□□□□ 0.52
USP6P35125 AC073869.1-201ENST00000415574 2762 ntBASIC18.33■□□□□ 0.52
USP6P35125 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP6P35125 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC18.33■□□□□ 0.52
USP6P35125 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
USP6P35125 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
USP6P35125 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
USP6P35125 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP6P35125 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC18.32■□□□□ 0.52
USP6P35125 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 AHCYP3-201ENST00000420053 1279 ntBASIC18.32■□□□□ 0.52
USP6P35125 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 MAGEA7P-201ENST00000436482 942 ntBASIC18.32■□□□□ 0.52
USP6P35125 CXXC1P1-202ENST00000489409 1212 ntBASIC18.32■□□□□ 0.52
USP6P35125 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 LY6E-215ENST00000523847 427 ntTSL 3 BASIC18.32■□□□□ 0.52
USP6P35125 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC18.32■□□□□ 0.52
USP6P35125 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC18.32■□□□□ 0.52
USP6P35125 AC133555.4-201ENST00000569081 152 ntBASIC18.32■□□□□ 0.52
USP6P35125 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC18.32■□□□□ 0.52
USP6P35125 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.32■□□□□ 0.52
USP6P35125 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP6P35125 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 PXK-210ENST00000479241 2817 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms