Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.04□□□□□ -0.48
CD40P25942 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 MST1P2-201ENST00000457982 2291 ntBASIC12.04□□□□□ -0.48
CD40P25942 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.04□□□□□ -0.48
CD40P25942 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD40P25942 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD40P25942 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 PES1P2-201ENST00000449745 1735 ntBASIC12.03□□□□□ -0.48
CD40P25942 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 AC131212.3-201ENST00000624087 4219 ntBASIC12.03□□□□□ -0.48
CD40P25942 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 OR7E115P-201ENST00000382617 1024 ntBASIC12.03□□□□□ -0.48
CD40P25942 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CD40P25942 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 AC005722.1-201ENST00000431878 964 ntBASIC12.03□□□□□ -0.48
CD40P25942 KRT18P62-201ENST00000446618 1287 ntBASIC12.03□□□□□ -0.48
CD40P25942 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.03□□□□□ -0.48
CD40P25942 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.03□□□□□ -0.48
CD40P25942 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.03□□□□□ -0.48
CD40P25942 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.03□□□□□ -0.48
CD40P25942 AC138466.5-201ENST00000624002 808 ntBASIC12.03□□□□□ -0.48
CD40P25942 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CD40P25942 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 LINC01230-201ENST00000625222 3017 ntBASIC12.03□□□□□ -0.48
CD40P25942 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.03□□□□□ -0.48
CD40P25942 PTENP1-202ENST00000532280 3996 ntBASIC12.03□□□□□ -0.48
CD40P25942 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 AL928654.5-201ENST00000624831 2501 ntBASIC12.03□□□□□ -0.48
CD40P25942 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD40P25942 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.03□□□□□ -0.48
CD40P25942 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD40P25942 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CD40P25942 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CD40P25942 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.02□□□□□ -0.48
CD40P25942 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 AC025183.3-201ENST00000623526 1482 ntBASIC12.02□□□□□ -0.48
CD40P25942 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 AC021305.1-201ENST00000520656 1514 ntBASIC12.02□□□□□ -0.48
CD40P25942 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 AC005089.1-201ENST00000619486 2241 ntBASIC12.02□□□□□ -0.48
CD40P25942 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD40P25942 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms