Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 ST20-AS1-201ENST00000560255 4223 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.84□□□□□ -0.51
COL8A2P25067 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 AC138761.6-201ENST00000583997 1423 ntBASIC11.84□□□□□ -0.51
COL8A2P25067 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
COL8A2P25067 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
COL8A2P25067 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
COL8A2P25067 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
COL8A2P25067 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
COL8A2P25067 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
COL8A2P25067 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC11.83□□□□□ -0.52
COL8A2P25067 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
COL8A2P25067 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC11.83□□□□□ -0.52
COL8A2P25067 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.83□□□□□ -0.52
COL8A2P25067 AC012362.1-201ENST00000434906 739 ntBASIC11.83□□□□□ -0.52
COL8A2P25067 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC11.83□□□□□ -0.52
COL8A2P25067 RNA5SP406-201ENST00000516106 112 ntBASIC11.83□□□□□ -0.52
COL8A2P25067 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC11.83□□□□□ -0.52
COL8A2P25067 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.83□□□□□ -0.52
COL8A2P25067 AC068867.1-201ENST00000559855 150 ntBASIC11.83□□□□□ -0.52
COL8A2P25067 MIR4265-201ENST00000582152 99 ntBASIC11.83□□□□□ -0.52
COL8A2P25067 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC11.83□□□□□ -0.52
COL8A2P25067 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
COL8A2P25067 LINC00244-201ENST00000625073 613 ntBASIC11.83□□□□□ -0.52
COL8A2P25067 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 TBC1D27-202ENST00000424239 1573 ntBASIC11.83□□□□□ -0.52
COL8A2P25067 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC11.83□□□□□ -0.52
COL8A2P25067 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
COL8A2P25067 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.83□□□□□ -0.52
COL8A2P25067 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC11.83□□□□□ -0.52
COL8A2P25067 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 AC005014.1-201ENST00000432006 2976 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
COL8A2P25067 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 AC090502.4-201ENST00000551714 1386 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
COL8A2P25067 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
COL8A2P25067 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
COL8A2P25067 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.82□□□□□ -0.52
COL8A2P25067 LYPLA2P1-203ENST00000447689 696 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC11.82□□□□□ -0.52
COL8A2P25067 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 BUD31-205ENST00000456893 512 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC11.82□□□□□ -0.52
COL8A2P25067 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms