Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CTLA4P16410 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.43□□□□□ -0.42
CTLA4P16410 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 BX679664.3-201ENST00000414070 555 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 AC113935.1-201ENST00000471722 555 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.43□□□□□ -0.42
CTLA4P16410 ALG1L13P-202ENST00000519320 584 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CTLA4P16410 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 AC026740.1-201ENST00000607068 791 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 AC079336.7-201ENST00000623428 1078 ntBASIC12.43□□□□□ -0.42
CTLA4P16410 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.43□□□□□ -0.42
CTLA4P16410 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.43□□□□□ -0.42
CTLA4P16410 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.43□□□□□ -0.42
CTLA4P16410 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CTLA4P16410 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.43□□□□□ -0.42
CTLA4P16410 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTLA4P16410 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.42□□□□□ -0.42
CTLA4P16410 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.42□□□□□ -0.42
CTLA4P16410 PFN1P12-201ENST00000455938 534 ntBASIC12.42□□□□□ -0.42
CTLA4P16410 AC108725.1-201ENST00000495472 409 ntBASIC12.42□□□□□ -0.42
CTLA4P16410 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.42□□□□□ -0.42
CTLA4P16410 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CTLA4P16410 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.42□□□□□ -0.42
CTLA4P16410 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 AL118558.3-201ENST00000607414 1079 ntBASIC12.42□□□□□ -0.42
CTLA4P16410 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.42□□□□□ -0.42
CTLA4P16410 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CTLA4P16410 NAP1L6-202ENST00000641404 1222 ntBASIC12.42□□□□□ -0.42
CTLA4P16410 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 AC015909.3-201ENST00000572855 1794 ntBASIC12.42□□□□□ -0.42
CTLA4P16410 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CTLA4P16410 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 LINC00567-201ENST00000569854 3409 ntBASIC12.42□□□□□ -0.42
CTLA4P16410 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.42□□□□□ -0.42
CTLA4P16410 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTLA4P16410 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms