Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC073150.1-201ENST00000450406 1084 ntBASIC12.56□□□□□ -0.4
HLA-DOBP13765 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC244093.1-201ENST00000610837 814 ntBASIC12.56□□□□□ -0.4
HLA-DOBP13765 MIR6799-201ENST00000620297 69 ntBASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC025183.3-201ENST00000623526 1482 ntBASIC12.56□□□□□ -0.4
HLA-DOBP13765 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 AC020907.1-201ENST00000616460 1350 ntBASIC12.56□□□□□ -0.4
HLA-DOBP13765 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AL359845.1-201ENST00000458202 1648 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AL591122.2-201ENST00000624125 1853 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 KRT8P43-201ENST00000406052 1458 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 BANF1P3-201ENST00000412556 261 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 BX679664.3-201ENST00000414070 555 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 RN7SL11P-201ENST00000471305 293 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC113935.1-201ENST00000471722 555 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AL109837.1-201ENST00000603272 613 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 MIR6769A-201ENST00000617340 73 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 AC079336.7-201ENST00000623428 1078 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 AL445250.1-201ENST00000641671 2259 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HLA-DOBP13765 PCDHA6-201ENST00000378126 3267 ntBASIC12.55□□□□□ -0.4
HLA-DOBP13765 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.55□□□□□ -0.4
HLA-DOBP13765 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms