Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 CTBP2P5-201ENST00000454986 1264 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 CROCCP4-201ENST00000457096 498 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.47□□□□□ -0.57
DEFA4P12838 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 AP000812.2-201ENST00000538934 718 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 KRT17P8-201ENST00000540749 863 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 RAB43P1-201ENST00000561790 589 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 AP006547.1-201ENST00000563435 692 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.47□□□□□ -0.57
DEFA4P12838 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.47□□□□□ -0.57
DEFA4P12838 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 VENTXP1-201ENST00000569334 2716 ntBASIC11.47□□□□□ -0.57
DEFA4P12838 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
DEFA4P12838 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
DEFA4P12838 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
DEFA4P12838 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
DEFA4P12838 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
DEFA4P12838 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 CICP1-201ENST00000416803 2410 ntBASIC11.46□□□□□ -0.57
DEFA4P12838 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 USP17L6P-201ENST00000382470 1197 ntBASIC11.46□□□□□ -0.57
DEFA4P12838 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
DEFA4P12838 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 AL035633.1-201ENST00000406139 838 ntBASIC11.46□□□□□ -0.57
DEFA4P12838 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.46□□□□□ -0.57
DEFA4P12838 AL161932.2-201ENST00000435436 679 ntBASIC11.46□□□□□ -0.57
DEFA4P12838 CNN2P10-201ENST00000443067 918 ntBASIC11.46□□□□□ -0.57
DEFA4P12838 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.46□□□□□ -0.57
DEFA4P12838 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.46□□□□□ -0.57
DEFA4P12838 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.46□□□□□ -0.57
DEFA4P12838 RBM8B-201ENST00000555532 525 ntBASIC11.46□□□□□ -0.57
DEFA4P12838 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.46□□□□□ -0.57
DEFA4P12838 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.46□□□□□ -0.57
DEFA4P12838 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
DEFA4P12838 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.46□□□□□ -0.57
DEFA4P12838 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.46□□□□□ -0.57
DEFA4P12838 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.46□□□□□ -0.57
DEFA4P12838 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.46□□□□□ -0.57
DEFA4P12838 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
DEFA4P12838 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DEFA4P12838 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
DEFA4P12838 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms