Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 HSPA8P9-201ENST00000485881 1943 ntBASIC15.75■□□□□ 0.11
TPM3P06753 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 ACTG1P3-201ENST00000431775 1114 ntBASIC15.75■□□□□ 0.11
TPM3P06753 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.75■□□□□ 0.11
TPM3P06753 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 AC005498.2-205ENST00000593218 784 ntBASIC15.75■□□□□ 0.11
TPM3P06753 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.75■□□□□ 0.11
TPM3P06753 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TPM3P06753 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TPM3P06753 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM3P06753 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TPM3P06753 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM3P06753 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TPM3P06753 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TPM3P06753 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 AL136309.1-201ENST00000403917 691 ntBASIC15.74■□□□□ 0.11
TPM3P06753 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.74■□□□□ 0.11
TPM3P06753 RNA5SP486-201ENST00000515961 83 ntBASIC15.74■□□□□ 0.11
TPM3P06753 TDH-203ENST00000531764 1110 ntBASIC15.74■□□□□ 0.11
TPM3P06753 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 ECM1P1-201ENST00000604092 1279 ntBASIC15.74■□□□□ 0.11
TPM3P06753 AC008494.3-201ENST00000606615 944 ntBASIC15.74■□□□□ 0.11
TPM3P06753 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.74■□□□□ 0.11
TPM3P06753 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC15.74■□□□□ 0.11
TPM3P06753 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TPM3P06753 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TPM3P06753 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 AC102953.2-201ENST00000609755 3026 ntBASIC15.73■□□□□ 0.11
TPM3P06753 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC15.73■□□□□ 0.11
TPM3P06753 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.73■□□□□ 0.11
TPM3P06753 AC124319.4-201ENST00000622931 2161 ntBASIC15.73■□□□□ 0.11
TPM3P06753 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TPM3P06753 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TPM3P06753 DDX12P-201ENST00000432996 2947 ntBASIC15.73■□□□□ 0.11
TPM3P06753 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 HNRNPMP1-201ENST00000560685 1768 ntBASIC15.73■□□□□ 0.11
TPM3P06753 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC15.73■□□□□ 0.11
TPM3P06753 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.73■□□□□ 0.11
TPM3P06753 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.73■□□□□ 0.11
TPM3P06753 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms