Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC091181.1-201ENST00000623762 2098 ntBASIC11.77□□□□□ -0.52
CD74P04233 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD74P04233 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD74P04233 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
CD74P04233 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CD74P04233 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.77□□□□□ -0.53
CD74P04233 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.77□□□□□ -0.53
CD74P04233 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.77□□□□□ -0.53
CD74P04233 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.77□□□□□ -0.53
CD74P04233 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.77□□□□□ -0.53
CD74P04233 AC002472.2-201ENST00000442739 958 ntBASIC11.77□□□□□ -0.53
CD74P04233 SPTLC1P1-201ENST00000447199 261 ntBASIC11.77□□□□□ -0.53
CD74P04233 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 EIF4HP1-201ENST00000453115 687 ntBASIC11.77□□□□□ -0.53
CD74P04233 PTP4A1P2-201ENST00000546033 454 ntBASIC11.77□□□□□ -0.53
CD74P04233 AC003686.1-201ENST00000550956 1034 ntBASIC11.77□□□□□ -0.53
CD74P04233 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
CD74P04233 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.77□□□□□ -0.53
CD74P04233 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 CHCHD2P3-201ENST00000603038 451 ntBASIC11.77□□□□□ -0.53
CD74P04233 WFDC1-204ENST00000613603 549 ntBASIC11.77□□□□□ -0.53
CD74P04233 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.77□□□□□ -0.53
CD74P04233 AL136301.1-201ENST00000615830 422 ntBASIC11.77□□□□□ -0.53
CD74P04233 AC015967.2-201ENST00000624092 234 ntBASIC11.77□□□□□ -0.53
CD74P04233 AC006435.4-201ENST00000625037 234 ntBASIC11.77□□□□□ -0.53
CD74P04233 AL356737.1-201ENST00000634391 234 ntBASIC11.77□□□□□ -0.53
CD74P04233 AL358472.5-202ENST00000641448 1267 ntBASIC11.77□□□□□ -0.53
CD74P04233 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CD74P04233 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.77□□□□□ -0.53
CD74P04233 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.77□□□□□ -0.53
CD74P04233 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC11.77□□□□□ -0.53
CD74P04233 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD74P04233 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 AC011700.1-201ENST00000610409 2627 ntBASIC11.76□□□□□ -0.53
CD74P04233 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 CTAGE10P-201ENST00000318353 2408 ntBASIC11.76□□□□□ -0.53
CD74P04233 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
CD74P04233 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CD74P04233 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD74P04233 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
CD74P04233 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CD74P04233 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.76□□□□□ -0.53
CD74P04233 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms