Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC13.8□□□□□ -0.2
PDGFBP01127 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC13.8□□□□□ -0.2
PDGFBP01127 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.8□□□□□ -0.2
PDGFBP01127 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.8□□□□□ -0.2
PDGFBP01127 JPT1-205ENST00000470924 663 ntTSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 AC022121.1-201ENST00000484584 579 ntBASIC13.8□□□□□ -0.2
PDGFBP01127 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.8□□□□□ -0.2
PDGFBP01127 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.8□□□□□ -0.2
PDGFBP01127 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PDGFBP01127 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.8□□□□□ -0.2
PDGFBP01127 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PDGFBP01127 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 AC011477.7-201ENST00000617163 1440 ntBASIC13.8□□□□□ -0.2
PDGFBP01127 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.8□□□□□ -0.2
PDGFBP01127 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDGFBP01127 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 AC002350.2-201ENST00000623894 1828 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 AJ011931.1-201ENST00000618749 2492 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 AL121994.1-201ENST00000413189 402 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.79□□□□□ -0.2
PDGFBP01127 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.79□□□□□ -0.2
PDGFBP01127 TPT1P11-201ENST00000458482 498 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 RN7SL677P-201ENST00000466970 319 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 RN7SL47P-201ENST00000488710 299 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 AP001102.1-201ENST00000528959 409 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 RN7SL134P-201ENST00000579756 303 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 AL031768.1-201ENST00000606542 701 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 BX510359.7-201ENST00000619819 630 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PDGFBP01127 CDIPT-AS1-203ENST00000638164 713 ntBASIC13.79□□□□□ -0.2
PDGFBP01127 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.79□□□□□ -0.2
PDGFBP01127 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.79□□□□□ -0.2
PDGFBP01127 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDGFBP01127 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 AC245140.2-201ENST00000624054 1939 ntBASIC13.78□□□□□ -0.2
PDGFBP01127 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PDGFBP01127 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDGFBP01127 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms