Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 DKKL1P1-201ENST00000400550 698 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 GGTLC4P-201ENST00000402176 664 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.53□□□□□ -0.4
ZIC3O60481 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.53□□□□□ -0.4
ZIC3O60481 AC008267.1-201ENST00000474858 1069 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 AC025186.1-201ENST00000478174 870 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 AC100858.1-201ENST00000514059 1228 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 MIR3940-201ENST00000579148 102 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 MIR4649-201ENST00000582839 64 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.53□□□□□ -0.4
ZIC3O60481 FAM90A12P-201ENST00000519497 2375 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 FAM90A24P-201ENST00000520792 2369 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
ZIC3O60481 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ZIC3O60481 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 AC117503.4-201ENST00000623229 1418 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.53□□□□□ -0.4
ZIC3O60481 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 RCC2P5-201ENST00000492126 1487 ntBASIC12.53□□□□□ -0.4
ZIC3O60481 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.52□□□□□ -0.4
ZIC3O60481 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.52□□□□□ -0.4
ZIC3O60481 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.52□□□□□ -0.4
ZIC3O60481 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ZIC3O60481 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.52□□□□□ -0.4
ZIC3O60481 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZIC3O60481 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 Z98885.3-201ENST00000624882 1757 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 AC106827.1-201ENST00000366454 431 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ZIC3O60481 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.52□□□□□ -0.41
ZIC3O60481 LYPLA2P1-203ENST00000447689 696 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 MPRIPP1-201ENST00000452433 1089 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.52□□□□□ -0.41
ZIC3O60481 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 MIR5572-201ENST00000583188 137 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
ZIC3O60481 MIR6858-201ENST00000620733 67 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 PTENP1-202ENST00000532280 3996 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
ZIC3O60481 AC130686.1-201ENST00000622936 2466 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 AC245140.2-201ENST00000624054 1939 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 AC020917.4-201ENST00000623994 1999 ntBASIC12.52□□□□□ -0.41
ZIC3O60481 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ZIC3O60481 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ZIC3O60481 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
ZIC3O60481 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms