Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AC011495.1-201ENST00000498085 584 ntBASIC12.49□□□□□ -0.41
RFT1Q96AA3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 ALG3P1-201ENST00000508806 1114 ntBASIC12.49□□□□□ -0.41
RFT1Q96AA3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 AC022497.1-201ENST00000624916 3691 ntBASIC12.49□□□□□ -0.41
RFT1Q96AA3 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RFT1Q96AA3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RFT1Q96AA3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 MSNP1-201ENST00000511640 1732 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 AC110048.1-201ENST00000604293 2157 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ARSEP1-201ENST00000420443 635 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 TMEM14DP-201ENST00000422205 345 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 FTH1P14-201ENST00000482930 551 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 RNA5SP486-201ENST00000515961 83 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 AC005586.2-201ENST00000563946 837 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 AL355385.1-201ENST00000606123 409 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 AC244669.2-201ENST00000612320 853 ntBASIC12.48□□□□□ -0.41
RFT1Q96AA3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RFT1Q96AA3 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RFT1Q96AA3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms