Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC4Q92889 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC4Q92889 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC4Q92889 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.94■□□□□ 0.14
ERCC4Q92889 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC4Q92889 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC4Q92889 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC4Q92889 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC4Q92889 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 SCARNA21-201ENST00000517026 139 ntBASIC15.94■□□□□ 0.14
ERCC4Q92889 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.94■□□□□ 0.14
ERCC4Q92889 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 AL512343.1-201ENST00000605837 169 ntBASIC15.94■□□□□ 0.14
ERCC4Q92889 AC008687.7-202ENST00000637404 953 ntBASIC15.94■□□□□ 0.14
ERCC4Q92889 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.94■□□□□ 0.14
ERCC4Q92889 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ERCC4Q92889 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.94■□□□□ 0.14
ERCC4Q92889 AC018629.1-201ENST00000623381 1736 ntBASIC15.94■□□□□ 0.14
ERCC4Q92889 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC4Q92889 TNRC18P1-201ENST00000502875 3650 ntBASIC15.93■□□□□ 0.14
ERCC4Q92889 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ERCC4Q92889 AC115284.2-201ENST00000624646 2054 ntBASIC15.93■□□□□ 0.14
ERCC4Q92889 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.93■□□□□ 0.14
ERCC4Q92889 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ERCC4Q92889 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ERCC4Q92889 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ERCC4Q92889 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.93■□□□□ 0.14
ERCC4Q92889 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC15.93■□□□□ 0.14
ERCC4Q92889 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ERCC4Q92889 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ERCC4Q92889 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ERCC4Q92889 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.93■□□□□ 0.14
ERCC4Q92889 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ERCC4Q92889 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.93■□□□□ 0.14
ERCC4Q92889 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.93■□□□□ 0.14
ERCC4Q92889 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.93■□□□□ 0.14
ERCC4Q92889 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.93■□□□□ 0.14
ERCC4Q92889 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ERCC4Q92889 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ERCC4Q92889 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.93■□□□□ 0.14
ERCC4Q92889 CR392039.2-201ENST00000623182 509 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms