Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC007952.5-201ENST00000572818 1486 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.36□□□□□ -0.43
AP3S1Q92572 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 SOCS2P1-201ENST00000417727 557 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AL450487.1-201ENST00000426799 995 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
AP3S1Q92572 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.36□□□□□ -0.43
AP3S1Q92572 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 SRD5A3P1-201ENST00000603021 949 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 HERC2P9-206ENST00000529624 5187 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.36□□□□□ -0.43
AP3S1Q92572 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 AP000593.2-201ENST00000542775 1433 ntBASIC12.36□□□□□ -0.43
AP3S1Q92572 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AP3S1Q92572 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
AP3S1Q92572 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 AP002008.2-201ENST00000635926 4870 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
AP3S1Q92572 AC103592.1-201ENST00000394513 664 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.35□□□□□ -0.43
AP3S1Q92572 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
AP3S1Q92572 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 AC069120.2-201ENST00000524091 540 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
AP3S1Q92572 RRP7BP-205ENST00000566851 833 ntBASIC12.35□□□□□ -0.43
AP3S1Q92572 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.35□□□□□ -0.43
AP3S1Q92572 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.35□□□□□ -0.43
AP3S1Q92572 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S1Q92572 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S1Q92572 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S1Q92572 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms