Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AL137028.1-201ENST00000620521 555 ntBASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 UBA3-212ENST00000630585 390 ntTSL 4 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 OR2T32P-201ENST00000403423 963 ntBASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 RN7SL483P-201ENST00000478417 285 ntBASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 MIR4763-201ENST00000581461 92 ntBASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 WSB1-213ENST00000583193 552 ntTSL 4 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF40Q8TER5 AC073488.1-201ENST00000416620 1600 ntBASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 MARK2P9-201ENST00000430958 1727 ntBASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 C2orf27AP2-201ENST00000438438 555 ntBASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 AL031058.1-201ENST00000561592 888 ntBASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 Z93930.2-203ENST00000585003 516 ntBASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 AC025165.4-201ENST00000602327 433 ntBASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF40Q8TER5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 FGD5P1-202ENST00000614866 2498 ntBASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 MIR324-201ENST00000362183 83 ntBASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 FTLP16-201ENST00000446400 513 ntBASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 RPSAP5-201ENST00000485258 884 ntBASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 MFSD12-215ENST00000615613 688 ntBASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARHGEF40Q8TER5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms