Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AL354877.1-201ENST00000424412 413 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC244107.1-201ENST00000442033 332 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 KLF2P1-201ENST00000447438 1042 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 HSPB1P2-201ENST00000448722 546 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 MIR4783-201ENST00000580343 82 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC104982.3-201ENST00000581995 514 ntBASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP61Q8NHU2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AC009474.1-201ENST00000455096 1565 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AC010970.1-201ENST00000445125 1848 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 RNMTL1P1-201ENST00000454103 560 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 SORD2P-201ENST00000558556 1069 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 TUBB1P2-201ENST00000422712 1306 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 TUBB1P1-201ENST00000503144 1300 ntBASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CFAP61Q8NHU2 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CFAP61Q8NHU2 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms