Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC016397.2-201ENST00000624848 1985 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 RBMXP1-201ENST00000408004 1191 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 PHBP3-201ENST00000412562 819 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 HMGA1P1-201ENST00000415560 1062 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 CD37-203ENST00000426897 1204 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 BICD1P1-201ENST00000457832 1222 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 OR4A49P-201ENST00000527050 632 ntBASIC11.17□□□□□ -0.62
VPS13CQ709C8 AL139317.2-201ENST00000556998 158 ntBASIC11.17□□□□□ -0.62
VPS13CQ709C8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC009779.7-201ENST00000609031 469 ntBASIC11.17□□□□□ -0.62
VPS13CQ709C8 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC069061.4-201ENST00000581294 1347 ntBASIC11.17□□□□□ -0.62
VPS13CQ709C8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 PLAC9P1-203ENST00000440031 223 ntBASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 PSME3-213ENST00000592169 826 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 CHCHD2P6-201ENST00000454346 447 ntBASIC11.17□□□□□ -0.62
VPS13CQ709C8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VPS13CQ709C8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13CQ709C8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 USP17L6P-201ENST00000382470 1197 ntBASIC11.16□□□□□ -0.62
VPS13CQ709C8 GSTM2P1-201ENST00000405166 654 ntBASIC11.16□□□□□ -0.62
VPS13CQ709C8 HLA-W-207ENST00000439514 771 ntBASIC11.16□□□□□ -0.62
VPS13CQ709C8 SAA2-206ENST00000530400 323 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 AL033381.2-201ENST00000603854 732 ntBASIC11.16□□□□□ -0.62
VPS13CQ709C8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13CQ709C8 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13CQ709C8 FTLP3-201ENST00000427242 528 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms