Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC019109.1-201ENST00000401725 1874 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 RN7SKP109-201ENST00000410592 316 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 RN7SL564P-201ENST00000496309 250 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC091769.1-201ENST00000619576 568 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 LINC00244-201ENST00000625073 613 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 TBC1D27-202ENST00000424239 1573 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC118758.2-201ENST00000614242 2813 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AC138761.6-201ENST00000583997 1423 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AL731571.1-201ENST00000617058 5428 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 PDXDC2P-206ENST00000534700 1315 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 IL9RP3-201ENST00000442856 1674 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 RNVU1-8-201ENST00000364272 125 ntBASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3F3CQ6NXT2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms